Lee yielded a hit in the first and second before giving way to Kendrick, who allowed a hit, struck out two and walked none.
Shane Victorino hit a two-run single off Rick VandenHurk during Philadelphia's four-run third inning. John Mayberry Jr. also singled in a run and Ty Wigginton had a sacrifice fly.
Blue Jays starter Ricky Romero tossed two innings of one-hit ball.